Upload your Multiple Sequece Alignment file:
ConSurf accepts external MSAs in the 7 formats supported by CLUSTAL W
. These are: NBRF/PIR, EMBL/SwissProt, Pearson (Fasta), GDE, Clustal, GCG/MSF and RSF format.
In case you provide an external MSA file in Fasta format, please use the "-" sign as the only gap symbol, as this is the only standard gap sign that ConSurf accepts.
Indicate the Query Sequence Name:
This should be the exact name of the sequence in the provided MSA file, that corresponds to the query protein.