Create a high resolution PyMol figure for 2VAA Chain: A
Please note: For all PyMOL commands, you should type absolute paths for the files you are about to download, from their new location (on your computer).
- Download the PDB_FILE updated with ConSurf's colors.
PDB_FILE hiding Insufficient Data
- Download the file consurf_new.py [or the color-blind freindly version: consurf_new_CBS.py].
- Start PyMOL.
- A. Load the Consurf's modified pdb file (not the original pdb file that used as an input)
In the PyMOL viewer window type:
PyMOL>"load PDB_FILE" (no quotes) and hit return.
B. Run the script to define ConSurf's color; Type:
PyMOL>"run consurf_new.py" (no quotes) and hit return.
PyMOL>"run consurf_new_CBS.py" (no quotes) and hit return.
Note: Please don't forget to write the path of the script file unless the script file is located at the pymol's root directory.